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The virus that changed it all

The Merriam Webster dictionary defines a virus as follows:[1]

any of a large group of submicroscopic infectious agents that are usually regarded as nonliving extremely complex molecules, that typically contain a protein coat surrounding an RNA or DNA core of genetic material but no semipermeable membrane, that are capable of growth and multiplication only in living cells, and that cause various important diseases in humans, animals, and plants.

The definition is in itself complex, starting with the fact there is no consensus as to whether a virus is a living being or not. The structure of a virus is quite simple: a protein surrounding a core with genetic material. Full stop. But even that simple configuration is able to cause important harm to other living beings.

Since January 2020, the whole world is upside down thanks to one of these viruses, a coronavirus known as COVID-19. In a series of entries in this blog, I will discuss, quoting Weezer, how “the world has turned and left me here, just where I was before you appeared”.[2]

The first entry of this blog mainly discusses, from my position as non-biologist and non-epidemiologist, how virus work and how COVID-19 jumped from a cave in China to the largest crisis of mankind in a century.

The meaning of life when you are a virus

Before saying a few words about the origin of the COVID-19, let’s make an important point about the purpose of a virus. Indeed, in our collective imagination we all have an image of an outbreak of a deadly virus that kills mankind in a quick and dramatic process. Looking only at movies, I can think about “I am legend”, “World War Z”, “Outbreak”, “12 monkeys” and “28 days later” as portraying that apocalyptical scenario. While that setting is useful to attract us to the cinema, it may not represent what one can expect from a virus.

Actually, the main purpose of a virus (and also of any animal, including us) is to reproduce itself, not to kill their host. A virus does not have brain so it cannot consciously alter its behaviour to ensure it jumps from one host to the other, perpetuating itself on Earth. But a virus that kills its host before it is able to jump to another host is dying with the host. From this point of view, Ebola, while scary, is a very inefficient virus as its lethality implies that outbreaks are short-lived and prevents widespread propagation.[3] On the other hand, COVID-19 (or the flu) have relatively low mortality rates, so they have many opportunities to propagate to different hosts, becoming endemic in the case of the flu. Other viruses, like VIH, remain dormant for a time in the body of the host, who does not know it is infected and therefore allows for propagation to other hosts. The underlying purpose of this strategy is to allow for propagation before killing the host.

It is hard to forecast how COVID-19 will evolve, but a common view across virologists is that it would become endemic on Earth, similar to flu. The development of vaccines may alter that path (more on vaccines in a later entry of this blog), but we should clearly remove the view that the virus will suddenly disappear from the world. Good news is that new mutations of the virus should be less lethal and more contagious, as that would be in line with the Darwinian idea of the survival of the fittest. More lethal mutations would just be too deadly for hosts and would not propagate too far (keeping fingers crossed, I am not wrong with this).

Up to here, my small discussion on the nature of viruses. As further reading, I recommend the book “Spillover” by David Quammen and, for a more entertaining although equally illuminating reading, “The lost city of the Monkey God”, by Douglas Preston.

Life in a (real) bat cave

Let’s turn now to the origin of COVID-19. I would like to be able to offer a conclusive answer here, but I am afraid I am far from knowing the truth and can only present hypothesis and ideas, for which I lack evidence. Anyway, here we go.

The most accepted theory about the origin of COVID-19 is that it appeared around an animal market in the Chinese city of Wuhan. The virus seemed to have jumped from bats to humans, probably taking another mammal as an intermediate host. In our interconnected and globalised world, it just needed some weeks to reach the five continents.

From here I want to focus on two aspects: (i) bats, and (ii) China.

About bats, they seem to be quite an apt host for viruses due to their habit of living in huge groups (of more than hundred thousand individuals) in dark and dirty caves, where hygienic conditions are, let’s put it mildly, poor (not talking about Batman’s batcave, of course). Bats hang from the ceiling of the cave during the day and, well, go to toilet in that position. So, their “residual” just falls to the floor or on the walls of the cave or on other bats. Extrapolating that to hundred thousand bats going to the toilet day after day in a closed space with poor ventilation, it is easy to imagine how life looks like there: ideal for viruses to develop. There are indeed creepy videos of snakes living in these caves together with bats and the layer of accumulated “residuals”, and feeding on them.[4]

A cave full of bats does not seem a place to be for humans. However, that brings me to the second point I wanted to raise: China. Indeed, Chinese growth in the last 30 years has been impressive but has also implied an amazing development of cities, as an important part of the population has moved from the countryside to cities. That has put a lot of pressure on the environment and has made remote places, like bat caves, to come closer to humans. It has been actually the other way round, humans becoming closer to bat caves, but I guess you understand what I mean.

Besides, a growing demand for meat of wild animals has appeared and some people has taken that business opportunity and started to hunt bats. And what better place to hunt bats that their cave, where you can find them by very large numbers? It became just a question of probabilities that a bat living in a cave in China could develop a virus, get in contact with humans and be able to transmit that virus to humans. The probability of this event to happen is extremely small (it is easier to win the lottery, provided you participate, of course) but we were buying a lot of tickets for it to occur. More frequent interactions between bats and humans in caves meant more possibilities for the transmission of a virus to humans to happen. With no human-bat interaction, a virus similar to COVID-19 could have appeared (even more than once) but it simply died in a dark cave somewhere in a remote place.

In this regard, it is also remarkable that the two latest major influenza pandemics have been originated in China or Hong-Kong (Hong-Kong flu in 1968 and more recently SARS). In particular, SARS served as a warning to mankind of our fragility, but seemingly went unnoticed. In a comparison with COVID-19, SARS was more lethal and less contagious, even if it took it some hours to travel from Hong Kong to Canada in a commercial flight, creating havoc thousands of kilometres away from its place of outbreak. Important lesson that was not learnt, as flight travelling was going on as normal in the first months of 2020.

There are many theories about the origin of the virus that claim it did not come from nature. They are quite diverse, but have the common point of finding a conspiration of dark forces to create an artificial virus and let them free through the planet. These theories stem mainly from the extreme coincidence that the COVID-19 appeared in Wuhan, the city where the Chinese State has a biological laboratory working with influenza virus. To be honest, I also find it to be an extreme coincidence, but prefer to keep it there. My feeling is that we will never know the origin of this virus, as the origin of the Spanish flu remain unclear (despite its reference to Spain, which had nothing to do with it).



[3]  Unfortunately, we are not short of deadly viruses on Earth. However, Ebola has attracted a lot of attention, when compared with Marburg or hantavirus, among others.

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